CEBRA c-Fos Brain Imaging Data

[ DOI: https://doi.org/10.35077/g.1192 ]

 

Dataset Citation:

Freyberg, Zachary, Watson, Alan, Logan, Ryan, Vasylieva, Iaroslavna, Smith, Reese, Buck, Silas, Aravind, Eshan. (2026). CEBRA c-Fos Brain Imaging Data. [ Collection / Dataset ]. Brain Image Library. https://doi.org/10.35077/g.1192

 

Abstract:

This dataset is part of a whole-brain imaging project that uses ribbon scanning confocal imaging of cleared whole mouse brains that have been injected with saline or morphine, and sacrificed 1 or 4 hours post injection. These brains were stained for c-Fos neuronal activity marker to map the whole brain response to morphine exposure. This also contains training data for the cell classification models used in the experiment, small 3D image cubes cut out of larger images containing either examples of "cells" or "non-cells".

 

Funding:

National Institutes of Health 5-R21-DA052419-01 Ultra-fast high-resolution imaging of whole mouse brain for the study of drug addiction

 

Contributors:

Aravind, Eshan (ProjectMember) [ORCID: https://orcid.org/0009-0008-3012-1846 ] University of Pittsburgh
Center for Biologic Imaging (ResearchGroup) University of Pittsburgh
Department of Cell Biology (ResearchGroup) University of Pittsburgh
Department of Psychiatry (ResearchGroup) University of Pittsburgh
Department of Psychiatry (ResearchGroup) University of Massachusetts Chan Medical School
Freyberg, Zachary (ProjectLeader) [ORCID: https://orcid.org/0000-0001-6460-0118 ] University of Pittsburgh
Watson, Alan (ProjectLeader) [ORCID: https://orcid.org/0000-0003-0632-8296 ] University of Pittsburgh
Logan, Ryan (ProjectLeader) [ORCID: https://orcid.org/0000-0001-8579-015X ] University of Massachusetts Chan Medical School
Vasylieva, Iaroslavna (ProjectMember) [ORCID: https://orcid.org/0000-0001-8932-763X ] University of Pittsburgh
Smith, Reese (ProjectMember) [ORCID: https://orcid.org/0000-0003-2088-6745 ] University of Pittsburgh
Buck, Silas (ProjectMember) [ORCID: https://orcid.org/0000-0002-9476-9210 ] University of Pittsburgh

 

Related Identifiers:

Requires [ URL : https://download.brainimagelibrary.org/3f/7b/3f7b7d2d87ae38f9 ];
Requires [ URL : https://download.brainimagelibrary.org/ca/bf/cabfde60dc961a9c ];